.. include:: /include/links.rst

.. _tutorialspol:

Tutorials: Analysis Tools
==========================

In this section, we will introduce the newly developed workflows that can be used in PySoftK_ for analysing polymers
and other soft-matter systems. Tutorials for a new set of functionalities like estimation of densities, detection of
ring-ring stacking enviorements, contact analysis have been developed.  

.. toctree::
   :maxdepth: 1

   contacts_tutorial
   ecc_tutorial
   intrinsic_density_tutorial
   micelle_whole_tutorial
   rgyr_tutorial
   rgyr_mdanalysis_vs_pysoftk
   RSA_tutorial
   RSA_protein_tutorial
   SCP_tutorial
   solvation_tutorial
   spherical_density_tutorial